Don’t drop output dimensions when only one parameter saved
Summary method now returns the summary matrix
Add tests
Add vignette
jagsUI 1.5.22021-06-18
Remove View function due to problematic interactions with RStudio
Improvements to traceplot and densityplot
Make sure output is reproducible when parallel=FALSE
Minor bugfixes
jagsUI 1.5.12019-07-30
Fix issue when chains adapted for different numbers of iterations
Fix crash when DIC was requested but JAGS couldn’t calculate it
Stop auto-converting 1 row/1 col matrices into vectors
Improve pp.check plotting function
Add some warnings about functions and arguments that will be deprecated soon
jagsUI 1.5.02018-09-12
Fix issues with NAs in parameters.
Fix missing arguments in autojags().
Handle errors in output processing so that samples are not lost completely.
Make sure a specified random seed is used for initial value functions.
Fix error where summary stats were printed in the wrong order for some parameters.
Don’t collapse 1 row/1col matrices into vectors automatically.
jagsUI 1.4.92017-12-12
Fix bug with DIC output introduced in 1.4.7.
jagsUI 1.4.82017-11-17
Minor changes to prep for CRAN submission.
Fix more issues with random seeds and problems with DIC.
Fix issue with setting seed affecting other random number generation.
Allow turning deviance/DIC monitoring on/off when updating an existing model.
Overhaul handling of adaptation; default to running a sequence of adapt() calls until JAGS reports adapation is adequate. Suggest minimum of 1000 adaptation iterations otherwise in man pages.
Change output of summary function. Add ability to control factories.
jagsUI 1.4.42016-12-03
Change default approach to generating random seeds.
Add S3 method for View()
Convert traceplot() to an S3 method from S4.
Fix to allow running in parallel when dependencies are in non-standard libraries.
Fix bug when updating jagsbasic class.
jagsUI 1.4.22016-02-22
Changes to NAMESPACE to get clean build check on R-devel.
Add ability to specify number of CPU cores to use when running in parallel.
Fix a problem where saving output for a single scalar parameter broke output processing.
Fix a problem where nonscalar estimated parameters with missing (i.e., non-estimated) values broke the display of summary stats.
Explicitly import functions from default packages to meet new standards for building with R-devel.
Change minimum required version of rjags to 3-13.
jagsUI 1.3.72015-06-11
Add verbose argument to functions to allow suppression of all text output in the console as the function runs.
Change method for closing connection to clusters when running in parallel to avoid closing unrelated connections.
Adjust output for jags.basic.
Fix problem with max.iter argument in autojags(). Clarify documentation and output for autojags().
Add option save.all.iter in autojags() function to combine MCMC samples from all iterative updates into final posterior.
Fix issue with calculating stats that sometimes occurred with a constant posterior distribution.
Fix error where autojags did not handle NA rhat values properly.
Added more helpful warning when at least one rhat value = NA.