diff options
Diffstat (limited to 'tests/testthat/test_IDS.R')
| -rw-r--r-- | tests/testthat/test_IDS.R | 24 |
1 files changed, 22 insertions, 2 deletions
diff --git a/tests/testthat/test_IDS.R b/tests/testthat/test_IDS.R index 8d28322..61d348d 100644 --- a/tests/testthat/test_IDS.R +++ b/tests/testthat/test_IDS.R @@ -27,11 +27,11 @@ test_that("IDS can fit models with covariates", { maxDistPC=0.5, maxDistOC=0.5, unitsOut="kmsq") set.seed(123) - (mod_sim <- IDS(lambdaformula = ~elev, detformulaDS = ~1, + mod_sim <- IDS(lambdaformula = ~elev, detformulaDS = ~1, dataDS=sim_umf$ds, dataPC=sim_umf$pc, availformula = ~1, durationDS=durs$ds, durationPC=durs$pc, maxDistPC=0.5, maxDistOC=0.5, - unitsOut="kmsq")) + unitsOut="kmsq") expect_equivalent(coef(mod_sim), c(3.0271179,-0.4858101,-2.5050244,-1.3729505), tol=1e-5) @@ -60,6 +60,18 @@ test_that("IDS can fit models with covariates", { plot(mod_sim) hist(mod_sim) dev.off() + + expect_error(nonparboot(mod_sim)) + expect_error(ranef(mod_sim)) + + # Separate detection models + mod_sep <- IDS(lambdaformula = ~elev, detformulaDS = ~1, detformulaPC = ~1, + dataDS=sim_umf$ds[1:100,], dataPC=sim_umf$pc[1:100,], + availformula = ~1, durationDS=durs$ds[1:100], durationPC=durs$pc[1:100], + maxDistPC=0.5, maxDistOC=0.5, + unitsOut="kmsq") + expect_equal(length(coef(mod_sim)), 4) + expect_equal(length(coef(mod_sep)), 5) }) test_that("IDS can fit models with occupancy data", { @@ -112,6 +124,14 @@ test_that("IDS can fit models with occupancy data", { unitsOut="kmsq") ) + # Just occupancy data + mod_oc <- IDS(lambdaformula = ~elev, detformulaDS = ~1, detformulaOC = ~1, + dataDS=sim_umf$ds, dataOC=sim_umf$oc, + maxDistOC=0.5, + unitsOut="kmsq") + + expect_equal(names(mod_oc), c("lam","ds","oc")) + }) test_that("IDS handles missing values", { |