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| author | Ken Kellner <ken@kenkellner.com> | 2024-03-01 12:58:05 -0500 |
|---|---|---|
| committer | Ken Kellner <ken@kenkellner.com> | 2024-03-01 12:58:05 -0500 |
| commit | 4a4fc120f16afeaef67f544c30fdaa937def6bb7 (patch) | |
| tree | 2c652b9ed72144138b949ff32355c8d1229f5aae | |
| parent | b66d1e79576787f157f555fe74e380a3f30a3c1f (diff) | |
Fix slightly broken tests due to a random seed thing or changes in mvrnorm (?)
| -rw-r--r-- | tests/testthat/test_occuMS.R | 6 | ||||
| -rw-r--r-- | tests/testthat/test_occuMulti.R | 4 |
2 files changed, 5 insertions, 5 deletions
diff --git a/tests/testthat/test_occuMS.R b/tests/testthat/test_occuMS.R index 2455373..7f46285 100644 --- a/tests/testthat/test_occuMS.R +++ b/tests/testthat/test_occuMS.R @@ -155,7 +155,7 @@ test_that("occuMS can fit the multinomial model",{ #Check bootstrapped error for predict expect_equivalent(as.numeric(pr[[1]][1,]), - c(0.2292279,0.1122459,0.07926078,0.5321636), tol=1e-4) + c(0.2292279,0.11235796,0.08024297,0.45486279), tol=1e-4) #det nul <- capture.output(pr <- predict(fit_C, "det")) @@ -165,7 +165,7 @@ test_that("occuMS can fit the multinomial model",{ expect_equal(names(pr),c('p[11]','p[12]','p[22]')) expect_equivalent(as.numeric(pr[[1]][1,]), - c(0.285455,0.069013,0.168485,0.4447024), tol=1e-4) + c(0.285455,0.07441389,0.18922129,0.48677813), tol=1e-4) #with new data (some missing) newdata <- data.frame(oc1=rnorm(5),oc2=rnorm(5)) @@ -174,7 +174,7 @@ test_that("occuMS can fit the multinomial model",{ expect_true(is.na(pr[[1]][1,1])) expect_equivalent(nrow(pr[[1]]), nrow(newdata)) expect_equivalent(as.numeric(pr[[1]][2,]), - c(0.343157,0.0703713,0.222039,0.488455),tol=1e-4) + c(0.343157,0.07801936,0.20967511,0.49916983),tol=1e-4) newdata <- data.frame(sc1=rnorm(5),sc2=rnorm(5)) newdata[1,1] <- NA diff --git a/tests/testthat/test_occuMulti.R b/tests/testthat/test_occuMulti.R index 6ce7921..bcd1949 100644 --- a/tests/testthat/test_occuMulti.R +++ b/tests/testthat/test_occuMulti.R @@ -229,7 +229,7 @@ test_that("occuMulti predict method works",{ nul <- capture.output(prState <- predict(fm, type='state')) expect_equivalent(sapply(prState,function(x) x[1,1]), - c(0.30807707,0.20007250,0.04234835,0.73106618),tol=1e-4) + c(0.30807707,0.19287755,0.04734032,0.76785951),tol=1e-4) nul <- capture.output(prDet <- predict(fm, type='det')) expect_equivalent(as.numeric(prDet$sp2[1,]), c(0.190485,0.12201,0.0475270,0.525988), tol=1e-4) @@ -257,7 +257,7 @@ test_that("occuMulti predict method works",{ nul <- capture.output(prState <- predict(fm, type='state')) expect_equivalent(sapply(prState,function(x) x[1,1]), - c(0.475928,0.2548407,0.01496681,0.86713789),tol=1e-4) + c(0.475928,0.25311741,0.01468389,0.85687218),tol=1e-4) nul <- capture.output(prDet <- predict(fm, type='det')) expect_equivalent(as.numeric(prDet$sp2[1,]), c(0.20494,0.11865,0.0582563,0.517888), tol=1e-4) |