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.PHONY: vignettes
NAME = $(shell grep 'Package:' DESCRIPTION | cut -d ' ' -f2)
VER = $(shell grep 'Version:' DESCRIPTION | cut -d ' ' -f2)
install:
R CMD INSTALL .
build:
Rscript -e "Rcpp::compileAttributes()"
make document
cd ..; R CMD build $(NAME)
check:
Rscript -e "devtools::check()"
test:
Rscript -e "options(testthat.progress.max_fails=30); devtools::test()"
document:
Rscript -e "devtools::document()"
README:
Rscript -e "rmarkdown::render('README.Rmd')"
pandoc README.md -o README.html
firefox README.html
sleep 3
rm README.html
vignettes: vignettes/random-effects.Rmd vignettes/JAGS-comparison.Rmd vignettes/spatial-models.Rmd vignettes/grouse-example.Rmd
touch test.png; mv *.png vignettes; rm vignettes/test.png
Rscript -e "devtools::build_vignettes()"
site:
Rscript -e "pkgdown::build_site()"
firefox docs/index.html
clean:
rm -r src/*.o
rm -r src/*.so
clean-install:
R CMD INSTALL --preclean .
coverage:
Rscript -e \
'Sys.setenv(NOT_CRAN="true"); covr::report(file="/tmp/ubms-report.html")'
firefox /tmp/ubms-report.html
vignettes/random-effects.Rmd: vignettes/random-effects.Rmd.orig
Rscript -e "knitr::knit('vignettes/random-effects.Rmd.orig', output='vignettes/random-effects.Rmd')"
vignettes/JAGS-comparison.Rmd: vignettes/JAGS-comparison.Rmd.orig
Rscript -e "knitr::knit('vignettes/JAGS-comparison.Rmd.orig', output='vignettes/JAGS-comparison.Rmd')"
vignettes/spatial-models.Rmd: vignettes/spatial-models.Rmd.orig
Rscript -e "knitr::knit('vignettes/spatial-models.Rmd.orig', output='vignettes/spatial-models.Rmd')"
vignettes/grouse-example.Rmd: vignettes/grouse-example.Rmd.orig
Rscript -e "knitr::knit('vignettes/grouse-example.Rmd.orig', output='vignettes/grouse-example.Rmd')"
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