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AgeCommit message (Expand)Author
2023-05-16Remove deprecated ggplot2 functionsKen Kellner
2022-04-12Merge branch 'master' into kfoldKen Kellner
2022-04-12update manual and namespaceJustin Cally
2022-04-07Use new loglik code instead of saving log_lik parameter when possibleKen Kellner
2022-04-03Initial version of kfold function for occuKen Kellner
2021-10-13Add timer to gof progress barKen Kellner
2021-10-10Add get_stancode methodKen Kellner
2021-09-29Specify priors on sigmasKen Kellner
2021-09-26Add plot_posteriors functionKen Kellner
2021-09-25Alias plot_effects to plot_marginalKen Kellner
2021-09-25Add runtime to model summary, fixes #46Ken Kellner
2021-09-25More changes to default priors and warn when covariates are not standardizedKen Kellner
2021-09-22Improve input processing of priorsKen Kellner
2021-08-21Pass info on priors for scalar submodels to Stan. Add some docs.Ken Kellner
2021-02-15Add map plotting functionKen Kellner
2021-02-15Fix generation of eigenvectorsKen Kellner
2021-02-14Add working RSR model for occupancyKen Kellner
2021-01-20Attempt to fix issues on r-oldrel-macos-x86_64Ken Kellner
2020-10-09Working stan_occuTTD fitting functionKen Kellner
2020-09-11Coef method returns numeric now. Add tests. Fixes #10Ken Kellner
2020-09-07Fix documentationKen Kellner
2020-09-06Add coef methodKen Kellner
2020-09-04Working multinomPois function. Missing values and tests don't workKen Kellner
2020-07-13Add getP and hist methodsKen Kellner
2020-07-11distsamp - package compiles but model doesn't runKen Kellner
2020-07-04Make separate submodel class for transition parametersKen Kellner
2020-06-24Add projected and turnover functions for dynamic occ modelsKen Kellner
2020-06-23Fix some bugs in residual calculationKen Kellner
2020-06-23Add fitted methodKen Kellner
2020-06-22Add stan_colext fitting functionKen Kellner
2020-06-14Rename marginal_plot to plot_marginalKen Kellner
2020-05-21Add tests and fix a few related bugsKen Kellner
2020-05-19Update docs to get clean check and enable travisKen Kellner
2020-05-06Add chi-squared test for occuRNKen Kellner
2020-05-04Add marginal effects plot functionKen Kellner
2020-05-04Add model selection functionKen Kellner
2020-05-03Add residual plotsKen Kellner
2020-04-30Add occupancy residuals following Wright et al 2019Ken Kellner
2020-04-30Add waic and loo methods and change argument name to submodel from typeKen Kellner
2020-04-29Add MacKenzie-Bailey GOF test for occupancy modelsKen Kellner
2020-04-27New backend for predictionKen Kellner
2020-04-24Re-work simulation and add gof for occupancyKen Kellner
2020-04-23Implement stan_occuRNKen Kellner
2020-04-22Fully implement stan_pcountKen Kellner
2020-04-09Add some methods and a pcount stan model that is far too slow to be usefulKen Kellner
2020-04-08Add ranef method, works like lme4 not unmarkedKen Kellner
2020-04-08Use sparse matrices for ZKen Kellner
2020-04-07Fix predict and clean up some check warningsKen Kellner
2020-04-07Remove estimate class and incorporate into submodel classKen Kellner
2020-04-06Initial commitKen Kellner
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