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author | Ken Kellner <ken@kenkellner.com> | 2021-06-16 13:08:14 -0400 |
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committer | Ken Kellner <ken@kenkellner.com> | 2021-06-16 13:09:57 -0400 |
commit | 154d2af4d36dc5eb14557afb5d35a2fb08e71fc2 (patch) | |
tree | 081eb55b070a195f0564d5ce0c185ae034e49197 | |
parent | 163254176b38680c8d604c6f338dec33569e3a40 (diff) |
Switch from Travis to Github actions
-rw-r--r-- | .Rbuildignore | 1 | ||||
-rw-r--r-- | .github/.gitignore | 1 | ||||
-rw-r--r-- | .github/workflows/R-CMD-check.yaml | 85 | ||||
-rw-r--r-- | .travis.yml | 12 | ||||
-rw-r--r-- | README.md | 3 |
5 files changed, 89 insertions, 13 deletions
diff --git a/.Rbuildignore b/.Rbuildignore index 540c36a..e9ca541 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -11,3 +11,4 @@ example2.R README.md env.R .travis.yml +^\.github$ diff --git a/.github/.gitignore b/.github/.gitignore new file mode 100644 index 0000000..2d19fc7 --- /dev/null +++ b/.github/.gitignore @@ -0,0 +1 @@ +*.html diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml new file mode 100644 index 0000000..90f242b --- /dev/null +++ b/.github/workflows/R-CMD-check.yaml @@ -0,0 +1,85 @@ +# For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag. +# https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions +on: + push: + branches: + - main + - master + pull_request: + branches: + - main + - master + +name: R-CMD-check + +jobs: + R-CMD-check: + runs-on: ${{ matrix.config.os }} + + name: ${{ matrix.config.os }} (${{ matrix.config.r }}) + + strategy: + fail-fast: false + matrix: + config: + - {os: windows-latest, r: 'release'} + - {os: macOS-latest, r: 'release'} + - {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} + - {os: ubuntu-20.04, r: 'devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} + - {os: ubuntu-20.04, r: 'oldrel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} + + env: + R_REMOTES_NO_ERRORS_FROM_WARNINGS: true + RSPM: ${{ matrix.config.rspm }} + GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} + + steps: + - uses: actions/checkout@v2 + + - uses: r-lib/actions/setup-r@v1 + with: + r-version: ${{ matrix.config.r }} + + - uses: r-lib/actions/setup-pandoc@v1 + + - name: Query dependencies + run: | + install.packages('remotes') + saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) + writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") + shell: Rscript {0} + + - name: Cache R packages + if: runner.os != 'Windows' + uses: actions/cache@v2 + with: + path: ${{ env.R_LIBS_USER }} + key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} + restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- + + - name: Install system dependencies + if: runner.os == 'Linux' + run: | + while read -r cmd + do + eval sudo $cmd + done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))') + + - name: Install dependencies + run: | + remotes::install_deps(dependencies = TRUE) + remotes::install_cran("rcmdcheck") + shell: Rscript {0} + + - name: Check + env: + _R_CHECK_CRAN_INCOMING_REMOTE_: false + run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--ignore-vignettes", "--no-build-vignettes", "--as-cran"), build_args = c("--no-manual", "--no-build-vignettes"), error_on = "warning", check_dir = "check") + shell: Rscript {0} + + - name: Upload check results + if: failure() + uses: actions/upload-artifact@main + with: + name: ${{ runner.os }}-r${{ matrix.config.r }}-results + path: check diff --git a/.travis.yml b/.travis.yml deleted file mode 100644 index 5dec191..0000000 --- a/.travis.yml +++ /dev/null @@ -1,12 +0,0 @@ -language: r -r: - - release - - devel - -cache: packages -sudo: false - -addons: - apt: - packages: - - jags @@ -1,8 +1,9 @@ jagsUI ========== + [![CRAN status](https://www.r-pkg.org/badges/version/jagsUI)](https://cran.r-project.org/web/packages/jagsUI/index.html) -[![Build Status](https://travis-ci.org/kenkellner/jagsUI.svg?branch=master)](https://travis-ci.org/kenkellner/jagsUI) +[![R build status](https://github.com/kenkellner/jagsUI/workflows/R-CMD-check/badge.svg)](https://github.com/kenkellner/jagsUI/actions) This package runs `JAGS` (Just Another Gibbs Sampler) analyses from within `R`. It acts as a wrapper and alternative interface for the functions in the `rjags` package and adds some custom output and graphical options. It also makes running chains in parallel quick and easy. |