Don't export show

14 files changed, 5 insertions, 29 deletions

diff --git a/NAMESPACE b/NAMESPACE
index f7baf99..5542b99 100644
--- a/NAMESPACE
+++ b/NAMESPACE
@@ -46,7 +46,7 @@ exportMethods(backTransform, coef, confint, fitted, getData,
               getP, getFP, getB, getY, head, hessian, linearComb, mle,
               modSel, nllFun, numSites, numY, obsCovs, obsNum, "obsCovs<-",
               obsToY, "obsToY<-", parboot, plot, hist, predict, profile,
-              residuals, sampleSize, SE, show, simulate, siteCovs,
+              residuals, sampleSize, SE, simulate, siteCovs,
               "siteCovs<-", summary, update, vcov, yearlySiteCovs,
               "yearlySiteCovs<-", "[", smoothed, projected, nonparboot, logLik,
               LRT, ranef, bup, crossVal, posteriorSamples, sigma, randomTerms, 
diff --git a/man/backTransform-methods.rd b/man/backTransform-methods.rd
index a038d3e..eb2f508 100644
--- a/man/backTransform-methods.rd
+++ b/man/backTransform-methods.rd
@@ -5,7 +5,6 @@
 \alias{backTransform,unmarkedEstimate-method}
 \alias{backTransform,unmarkedFit-method}
 \alias{backTransform,unmarkedLinComb-method}
-\alias{show,unmarkedBackTrans-method}
 
 \title{Methods for Function backTransform in Package `unmarked'}
 \description{Methods for function \code{backTransform} in Package `unmarked'. 
diff --git a/man/crossVal.Rd b/man/crossVal.Rd
index 584a264..bce285d 100644
--- a/man/crossVal.Rd
+++ b/man/crossVal.Rd
@@ -5,8 +5,6 @@
 \alias{crossVal,unmarkedFitList-method}
 \alias{unmarkedCrossVal-class}
 \alias{unmarkedCrossValList-class}
-\alias{show,unmarkedCrossVal-method}
-\alias{show,unmarkedCrossValList-method}
 
 \title{Cross-validation methods for fitted unmarked models and fit lists}
 
diff --git a/man/linearComb-methods.Rd b/man/linearComb-methods.Rd
index 83d3764..77a8321 100644
--- a/man/linearComb-methods.Rd
+++ b/man/linearComb-methods.Rd
@@ -4,7 +4,7 @@
 \alias{linearComb-methods}
 \alias{linearComb,unmarkedEstimate,matrixOrVector-method}
 \alias{linearComb,unmarkedFit,matrixOrVector-method}
-\alias{show,unmarkedLinComb-method}
+
 \title{Methods for Function linearComb in Package `unmarked'}
 \description{
 Methods for function \code{linearComb} in Package `unmarked'
@@ -30,4 +30,4 @@ fm <- multinomPois(~ 1 ~ ufc + trba, ovenFrame)
 linearComb(fm, c(1, 0.5, 0.5), type = "state")
 linearComb(fm, matrix(c(1, 0.5, 0.5, 1, 0, 0, 1, 0, 0.5), 3, 3,
   byrow=TRUE), type="state")
-}
\ No newline at end of file
+}
diff --git a/man/modSel.Rd b/man/modSel.Rd
index 1ca99a7..80e9002 100644
--- a/man/modSel.Rd
+++ b/man/modSel.Rd
@@ -4,7 +4,6 @@
 \alias{modSel}
 \alias{modSel-methods}
 \alias{unmarkedModSel-class}
-\alias{show,unmarkedModSel-method}
 \alias{summary,unmarkedModSel-method}
 \alias{coef,unmarkedModSel-method}
 \alias{SE,unmarkedModSel-method}
diff --git a/man/parboot.Rd b/man/parboot.Rd
index 6b6493f..dbc8bee 100644
--- a/man/parboot.Rd
+++ b/man/parboot.Rd
@@ -1,7 +1,7 @@
 \name{parboot}
 \alias{parboot}
 \alias{plot,parboot,missing-method}
-\alias{show,parboot-method}
+
 \title{Parametric bootstrap method for fitted models inheriting class.}
 \description{Simulate datasets from a fitted model, refit the model, and
   generate a sampling distribution for a user-specified fit-statistic.}
diff --git a/man/posteriorSamples.Rd b/man/posteriorSamples.Rd
index 0bd0ac7..395992b 100644
--- a/man/posteriorSamples.Rd
+++ b/man/posteriorSamples.Rd
@@ -4,7 +4,6 @@
 \alias{posteriorSamples,unmarkedRanef-method}
 \alias{posteriorSamples,unmarkedFit-method}
 \alias{unmarkedPostSamples-class}
-\alias{show,unmarkedPostSamples-method}
 \alias{[,unmarkedPostSamples,ANY,ANY,ANY-method}
 
 \title{Draw samples from the posterior predictive distribution}
diff --git a/man/unmarkedEstimate-class.Rd b/man/unmarkedEstimate-class.Rd
index 1572212..ac95b35 100644
--- a/man/unmarkedEstimate-class.Rd
+++ b/man/unmarkedEstimate-class.Rd
@@ -3,7 +3,6 @@
 \docType{class}
 \alias{unmarkedEstimate}
 \alias{unmarkedEstimate-class}
-\alias{show,unmarkedEstimate-method}
 \alias{summary,unmarkedEstimate-method}
 \title{Class "unmarkedEstimate"}
 \description{Contains parameter estimates, covariance matrix, and metadata}
@@ -33,7 +32,6 @@ Creating these objects is done internally not by users.
     \item{linearComb}{\code{signature(obj = "unmarkedEstimate", 
 		coefficients = "matrixOrVector")}}
     \item{SE}{\code{signature(obj = "unmarkedEstimate")}}
-    \item{show}{\code{signature(object = "unmarkedEstimate")}}
     \item{vcov}{\code{signature(object = "unmarkedEstimate")}}
 	 }
 }
diff --git a/man/unmarkedEstimateList-class.Rd b/man/unmarkedEstimateList-class.Rd
index 3aa42b0..3685898 100644
--- a/man/unmarkedEstimateList-class.Rd
+++ b/man/unmarkedEstimateList-class.Rd
@@ -3,7 +3,6 @@
 \docType{class}
 \alias{unmarkedEstimateList-class}
 \alias{names,unmarkedEstimateList-method}
-\alias{show,unmarkedEstimateList-method}
 \alias{summary,unmarkedEstimateList-method}
 \alias{[,unmarkedEstimateList,ANY,ANY,ANY-method}
 \title{Class "unmarkedEstimateList"}
diff --git a/man/unmarkedFit-class.Rd b/man/unmarkedFit-class.Rd
index 5fa6528..8b6a662 100644
--- a/man/unmarkedFit-class.Rd
+++ b/man/unmarkedFit-class.Rd
@@ -48,7 +48,6 @@
 \alias{unmarkedFitDSO-class}
 \alias{unmarkedFitMMO-class}
 \alias{plot,profile,missing-method}
-\alias{show,unmarkedFit-method}
 \alias{summary,unmarkedFit-method}
 \alias{summary,unmarkedFitDS-method}
 \alias{smoothed}
@@ -132,7 +131,6 @@ extracted using the methods described below.
     \item{sampleSize}{\code{signature(object = "unmarkedFit")}: returns number
 		of sites in sample }
     \item{SE}{\code{signature(obj = "unmarkedFit")}: returns standard errors }
-    \item{show}{\code{signature(object = "unmarkedFit")}: concise results }
     \item{summary}{\code{signature(object = "unmarkedFit")}: results with more
 		details }
     \item{update}{\code{signature(object = "unmarkedFit")}: refit model with
diff --git a/man/unmarkedFrame-class.Rd b/man/unmarkedFrame-class.Rd
index 44925b5..1c40ed3 100644
--- a/man/unmarkedFrame-class.Rd
+++ b/man/unmarkedFrame-class.Rd
@@ -27,11 +27,6 @@
 \alias{unmarkedFrameGPC-class}
 \alias{unmarkedFrameDSO-class}
 \alias{unmarkedFrameMMO-class}
-\alias{show,unmarkedFrame-method}
-\alias{show,unmarkedFrameOccuMulti-method}
-\alias{show,unmarkedFrameOccuTTD-method}
-\alias{show,unmarkedMultFrame-method}
-\alias{show,unmarkedFrameOccuCOP-method}
 \alias{summary,unmarkedFrame-method}
 \alias{summary,unmarkedFrameDS-method}
 \alias{summary,unmarkedMultFrame-method}
@@ -85,8 +80,6 @@ argument of the fitting functions.
       panels data should be split over.}
     \item{projection}{\code{signature(object = "unmarkedFrame")}: extract
 		projection information }
-    \item{show}{\code{signature(object = "unmarkedFrame")}: view data as
-		data.frame }
     \item{siteCovs}{\code{signature(object = "unmarkedFrame")}: extract
 		site-level covariates }
     \item{siteCovs<-}{\code{signature(object = "unmarkedFrame")}: add or
diff --git a/man/unmarkedPower-class.Rd b/man/unmarkedPower-class.Rd
index 3df4d77..de50802 100644
--- a/man/unmarkedPower-class.Rd
+++ b/man/unmarkedPower-class.Rd
@@ -1,7 +1,6 @@
 \name{unmarkedPower-methods}
 \alias{unmarkedPower-methods}
 \alias{unmarkedPower-class}
-\alias{show,unmarkedPower-method}
 \alias{summary,unmarkedPower-method}
 \alias{update,unmarkedPower-method}
 
@@ -10,7 +9,6 @@
 \description{Various functions to summarize and update unmarkedPower objects}
 
 \usage{
-\S4method{show}{unmarkedPower}(object)
 \S4method{summary}{unmarkedPower}(object, ...)
 \S4method{update}{unmarkedPower}(object, ...)
 }
@@ -23,7 +21,7 @@
 }
 
 \value{
-  For \code{show} and \code{summary}, summary output is printed to the console.
+  For \code{summary}, summary output is printed to the console.
   For \code{update}, a new \code{powerAnalysis} object corresponding to the 
   new arguments provided.
 }
diff --git a/man/unmarkedPowerList.Rd b/man/unmarkedPowerList.Rd
index 3dbbcf1..5cd7c44 100644
--- a/man/unmarkedPowerList.Rd
+++ b/man/unmarkedPowerList.Rd
@@ -4,7 +4,6 @@
 \alias{unmarkedPowerList,unmarkedFit-method}
 \alias{unmarkedPowerList-class}
 \alias{unmarkedPowerList-methods}
-\alias{show,unmarkedPowerList-method}
 \alias{summary,unmarkedPowerList-method}
 \alias{plot,unmarkedPowerList,ANY-method}
 
@@ -24,7 +23,6 @@
 \S4method{unmarkedPowerList}{list}(object, ...)
 \S4method{unmarkedPowerList}{unmarkedFit}(object, coefs, design, alpha=0.05,
                                           nulls=list(), nsim=100, parallel=FALSE, ...)
-\S4method{show}{unmarkedPowerList}(object)
 \S4method{summary}{unmarkedPowerList}(object, ...)
 \S4method{plot}{unmarkedPowerList,ANY}(x, power=NULL, param=NULL, ...)
 }
diff --git a/man/unmarkedRanef-class.Rd b/man/unmarkedRanef-class.Rd
index 3b070b3..ebbd61b 100644
--- a/man/unmarkedRanef-class.Rd
+++ b/man/unmarkedRanef-class.Rd
@@ -6,7 +6,6 @@
 \alias{bup,unmarkedRanef-method}
 \alias{confint,unmarkedRanef-method}
 \alias{plot,unmarkedRanef,missing-method}
-\alias{show,unmarkedRanef-method}
 
 \title{Class \code{"unmarkedRanef"}}
 
@@ -36,8 +35,6 @@ Objects can be created by calls of the form \code{\link{ranef}}.
       confidence intervals.}
     \item{plot}{\code{signature(x = "unmarkedRanef", y = "missing")}:
       Plot the posteriors using \code{\link{xyplot}}}
-    \item{show}{\code{signature(object = "unmarkedRanef")}: Display the
-    modes and confidence intervals}
 }
 }