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| -rw-r--r-- | .Rbuildignore | 3 | ||||
| -rw-r--r-- | DESCRIPTION | 3 | ||||
| -rw-r--r-- | README.md | 3 | ||||
| -rw-r--r-- | _pkgdown.yml | 19 | ||||
| -rw-r--r-- | pkgdown/extra.css | 5 |
5 files changed, 30 insertions, 3 deletions
diff --git a/.Rbuildignore b/.Rbuildignore index bc1cb89..9157390 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -13,4 +13,5 @@ env.R .travis.yml ^\.github$ Makefile -docs/* +^docs$ +^pkgdown$ diff --git a/DESCRIPTION b/DESCRIPTION index 12a703d..729fb2a 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -20,6 +20,7 @@ Suggests: knitr, markdown, tinytest SystemRequirements: JAGS (http://mcmc-jags.sourceforge.net) Description: A set of wrappers around 'rjags' functions to run Bayesian analyses in 'JAGS' (specifically, via 'libjags'). A single function call can control adaptive, burn-in, and sampling MCMC phases, with MCMC chains run in sequence or in parallel. Posterior distributions are automatically summarized (with the ability to exclude some monitored nodes if desired) and functions are available to generate figures based on the posteriors (e.g., predictive check plots, traceplots). Function inputs, argument syntax, and output format are nearly identical to the 'R2WinBUGS'/'R2OpenBUGS' packages to allow easy switching between MCMC samplers. License: GPL-3 -URL: https://github.com/kenkellner/jagsUI +URL: https://kenkellner.com/jagsUI/ +BugReports: https://github.com/kenkellner/jagsUI/issues NeedsCompilation: no VignetteBuilder: knitr @@ -1,9 +1,10 @@ jagsUI ========== - +<!-- badges: start --> [](https://cran.r-project.org/web/packages/jagsUI/index.html) [](https://github.com/kenkellner/jagsUI/actions) +<!-- badges: end --> This package runs `JAGS` (Just Another Gibbs Sampler) analyses from within `R`. It acts as a wrapper and alternative interface for the functions in the `rjags` package and adds some custom output and graphical options. It also makes running chains in parallel quick and easy. diff --git a/_pkgdown.yml b/_pkgdown.yml new file mode 100644 index 0000000..9b934ea --- /dev/null +++ b/_pkgdown.yml @@ -0,0 +1,19 @@ +authors: + Ken Kellner: + href: https://kenkellner.com + +reference: + - title: Run JAGS + contents: + - autojags + - jags + - jags.basic + - update + + - title: View output + contents: + - densityplot + - jags.View + - pp.check + - traceplot + - whiskerplot diff --git a/pkgdown/extra.css b/pkgdown/extra.css new file mode 100644 index 0000000..6c9a253 --- /dev/null +++ b/pkgdown/extra.css @@ -0,0 +1,5 @@ +body { font-family: 'helvetica', sans-serif; } +a:link { color:#17547f; text-decoration: none;} +a:visited { color:#17547f; text-decoration: none;} +a:hover { color:#17547f; text-decoration: underline;} +h1 { color:#990000; font-weight:bold } |