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author | Ken Kellner <ken@kenkellner.com> | 2023-08-21 11:52:59 -0400 |
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committer | Ken Kellner <ken@kenkellner.com> | 2023-08-21 11:52:59 -0400 |
commit | 307add525155353ebfe7993e6915b01f8f0fb252 (patch) | |
tree | e5098865b721fc3ae0eeb5b4d5e9f619647b9057 | |
parent | ec1ff8ad9966273b8fde9cb0b19d4d24226a183d (diff) |
Add CI and update README
-rw-r--r-- | .Rbuildignore | 1 | ||||
-rw-r--r-- | .github/.gitignore | 1 | ||||
-rw-r--r-- | .github/workflows/R-CMD-check.yaml | 53 | ||||
-rw-r--r-- | NEWS | 5 | ||||
-rw-r--r-- | README.md | 5 |
5 files changed, 64 insertions, 1 deletions
diff --git a/.Rbuildignore b/.Rbuildignore index 3398c83..c04b6a7 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -5,3 +5,4 @@ README.md oldNEWS Rplots.pdf +^\.github$ diff --git a/.github/.gitignore b/.github/.gitignore new file mode 100644 index 0000000..2d19fc7 --- /dev/null +++ b/.github/.gitignore @@ -0,0 +1 @@ +*.html diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml new file mode 100644 index 0000000..39efba7 --- /dev/null +++ b/.github/workflows/R-CMD-check.yaml @@ -0,0 +1,53 @@ +# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples +# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help +# +# NOTE: This workflow is overkill for most R packages and +# check-standard.yaml is likely a better choice. +# usethis::use_github_action("check-standard") will install it. +on: + push: + branches: [main, master] + pull_request: + branches: [main, master] + +name: R-CMD-check + +jobs: + R-CMD-check: + runs-on: ${{ matrix.config.os }} + + name: ${{ matrix.config.os }} (${{ matrix.config.r }}) + + strategy: + fail-fast: false + matrix: + config: + - {os: windows-latest, r: 'release'} + - {os: macOS-latest, r: 'release'} + - {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} + - {os: ubuntu-20.04, r: 'devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} + - {os: ubuntu-20.04, r: 'oldrel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} + + env: + GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} + R_KEEP_PKG_SOURCE: yes + + steps: + - uses: actions/checkout@v3 + + - uses: r-lib/actions/setup-pandoc@v2 + + - uses: r-lib/actions/setup-r@v2 + with: + r-version: ${{ matrix.config.r }} + http-user-agent: ${{ matrix.config.http-user-agent }} + use-public-rspm: true + + - uses: r-lib/actions/setup-r-dependencies@v2 + with: + extra-packages: any::rcmdcheck + needs: check + + - uses: r-lib/actions/check-r-package@v2 + with: + upload-snapshots: true @@ -1,3 +1,8 @@ +CHANGES in 0.2.9 (2023-08-21) + + * Ken Kellner takes over as Maintainer + * `RandomFields` removed from suggests + * Old versions of `simExpCorrRF`, `simDynoccSpatial`, and `simPPe` can be found in `inst/RandomFieldsSupport`; see the corresponding help files for how to access these functions from within R. CHANGES in 0.2.8 (2022-12-01) @@ -1,10 +1,13 @@ AHMbook ======= +[![R build +status](https://github.com/kenkellner/AHMbook/workflows/R-CMD-check/badge.svg)](https://github.com/kenkellner/AHMbook/actions) [![CRAN status](https://www.r-pkg.org/badges/version/AHMbook)](https://cran.r-project.org/web/packages/AHMbook/index.html) [![Downloads](https://cranlogs.r-pkg.org/badges/last-month/AHMbook)](https://www.r-pkg.org/services) - The first volume of the book *Applied Hierarchical Modeling in Ecology: Analysis of distribution, abundance and species richness in R and BUGS* by Marc Kéry and Andy Royle appeared early in 2016, the second volume in October 2020. See the [book web page](http://www.mbr-pwrc.usgs.gov/pubanalysis/keryroylebook/). A number of R functions and data sets are needed to complement the code in the book, and these are included in this R package. + +Ken Kellner has taken over maintenance of the `AHMbook` package as of August 2023. All issues and pull requests should be submitted to this repository. The original repository is [here](https://github.com/mikemeredith/AHMbook). |