Reference

Modeling functions
stan_colext()	Fit the MacKenzie et al. (2003) Dynamic Occupancy Model
stan_distsamp()	Fit the Royle et al. (2004) Distance Sampling Model
stan_multinomPois()	Fit the Multinomial-Poisson Mixture Model
stan_occu()	Fit the MacKenzie et al. (2002) Occupancy Model
stan_occuRN()	Fit the Occupancy Model of Royle and Nichols (2003)
stan_occuTTD()	Fit Time-to-detection Occupancy Models
stan_pcount()	Fit the N-mixture model of Royle (2004)
Model diagnostics
fitted(<ubmsFit>)	Extract Fitted Values
gof()	Check model goodness-of-fit
plot_residuals(<ubmsFit>)	Plot Model Residuals
residuals(<ubmsFit>)	Extract Model Residuals
traceplot(<ubmsFit>)	Markov Chain Traceplots
Model selection
fitList(<ubmsFit>)	Create a List of ubmsFit Models
loo(<ubmsFit>)	Leave-one-out Cross Validation
modSel(<ubmsFitList>)	Model Selection For a List of ubmsFit Models
waic(<ubmsFit>)	Widely Applicable Information Criterion (WAIC)
Inference
extract(<ubmsFit>)	Extract Samples From a ubmsFit Model
plot_effects(<ubmsFit>) plot_marginal(<ubmsFit>)	Plot Marginal Effects of Covariates
posterior_linpred(<ubmsFit>)	Posterior Distribution of the Linear Predictor
posterior_predict(<ubmsFit>)	Draw from the posterior predictive distribution
predict(<ubmsFit>)	Predict parameter values from a fitted model
projected()	Projected Occupancy Trajectories
ranef(<ubmsFit>)	Extract Random Effects
turnover()	Turnover Probability